Publications
2022
Chaudhary, A. and Schneitz, K. (2022). “Using time-resolved fluorescence anisotropy to study protein clustering.” Methods Mol Biol in press.
Cerrone, L., Vijayan, A., Schneitz, K. and Hamprecht, F.A. (2022) “CellTypeGraph: A new geometric computer vision benchmark.” Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition.
Vijayan, A., Strauss, S., Tofanelli, R., Mody, T.A., Lee, K., Tsiantis, M., Smith, R.S. and Schneitz, K. (2022) "The annotation and analysis of complex 3D plant organs using 3DCoordX.” Plant Physiology doi: 10.1093/plphys/kiac145.
2021
Chaudhary, A., Chen, X., Leśniewska, B., Boikine, R., Gao, J., Wolf, S. and Schneitz, K. (2021). “Cell wall damage attenuates root hair patterning and tissue morphogenesis mediated by the receptor kinase STRUBBELIG.” Development 148:dev199425.
Vijayan, A., Tofanelli, R., Strauss, S., Cerrone, L., Wolny, A., Strohmeier, J., Kreshuk, A., Hamprecht, F., Smith, S.R. and Schneitz, K. (2021). “A digital 3D reference atlas reveals cellular growth patterns shaping the Arabidopsis ovule.” eLife 10:e63262.
2020
Cabrera, B., Hirl, R.T., Zhu, J., Schäufele, R. and Schnyder, H. (2020). “Atmospheric CO2 and VPD alter the diel oscillation of leaf elongation in perennial ryegrass: compensation of hydraulic limitation by stored-growth” New Phytol 227:1776-1789.
Chaudhary, A., Chen, X., Gao, J., Lesniewska, B., Hammerl, R., Dawid, C. and Schneitz, K (2020). The Arabidopsis receptor kinase STRUBBELIG regulates the response to cellulose deficiency. PLoS Genetics 16:e1008433.
Engelhardt, S., Kopischke, M., Hofer, J., Probst, K., McCollum, C. and Hückelhoven R. (2020). “Barley RIC157 is involved in RACB-mediated susceptibility to powdery mildew.” bioRxiv doi: 10.1101/848226.
Garcia, V.J., Xu, S-L., Ravikumar, R., Wang, W., Elliott, L., Fesenko, M., Altmann, M., Falter-Braun, P., Moore, I., Burlingame, A., Assaad, F.F., Wang, Z.Y. 2020. TRIPP is a plant-specific component of the Arabidopsis TRAPPII membrane trafficking complex with important roles in plant development. Plant Cell 32:2424.
Hoefle, C., McCollum, C., Hückelhoven, R. (2020). Barley ROP-Interactive Partner-a organizes into RAC1- and MICROTUBULE-ASSOCIATED ROP-GTPASE ACTIVATING PROTEIN 1-dependent membrane domains. BMC Plant Biol 20:94.
McCollum, C., Engelhardt, S., Weiss, L., Hückelhoven, R. (2020). ROP INTERACTIVE PARTNER b interacts with RACB and supports fungal penetration into barley epidermal cells. Plant Phys 184:823-836.
Mergner, J., Frejno, M., List, M., Papacek, M., Chen, X., Chaudhary, A., Samaras, P., Richter, S., Shikata, H., Messerer, M., Lang, D., Altmann, S., Cyprys, P., Zolg, D. P., Mathieson, T., Bantscheff, M., Hazarika, R. R., Schmidt, T., Dawid, C., Dunkel, A., Hofmann, T., Sprunck, S., Falter-Braun, P., Johannes, F., Mayer, K. F. X., Jürgens, G., Wilhelm, M., Baumbach, J., Grill, E., Schneitz, K., Schwechheimer, C., and Küster, B. (2020). "Mass-spectrometry-based draft of the Arabidopsis proteome". Nature 579:409-414.
Poretska, O., Yang, S., Pitorre, D., Poppenberger, B., Sieberer, T. (2020). AMP1 and CYP78A5/7 act through a common pathway to govern cell fate maintenance in Arabidopsis thaliana. PLoS Genet 16: e1009043.
Weiss, L., Reiner, T., Mergner, J., Küster, B., Feher, A., Hensel, G., Gahrtz, M., Kumlehn, J., Engelhardt, S., Hückelhoven, R. (2020). Posttranslational modification of the RHO of plants protein RACB by phosphorylation and cross-kingdom conserved ubiquitination. bioRxiv 121228.
Wolny, A., Cerrone, L., Vijayan, A., Tofanelli, R., Vilches Barro, A., Louveaux, M., Wenzl, C., Strauss, S., Wilson-Sánchez, D., Lymbouridou, R., Steigleder, S., Pape, C., Bailoni, A., Duran-Nebreda, S., Bassel, G., Lohmann, J., Tsiantis, M., Hamprecht, F.A., Schneitz, K., Maizel, A. and Kreshuk, A. (2020). “Accurate and versatile 3D segmentation of plant tissues at cellular resolution.” eLife 9:e57613.
2019
Engelhardt, S., Kopischke, M., Hofer, J,. Probst, K., McCollum, C., Hückelhoven, R. (2019). Barley RIC157 is involved in RACB-mediated susceptibility to powdery mildew. bioRxiv 848226.
Tofanelli, R., Vijayan, A., Scholz, S. and Schneitz, K. (2019). Protocol for rapid clearing and staining of fixed Arabidopsis ovules for improved imaging by confocal laser scanning microscopy. Plant Methods, 15:120.
Kalde, M., Elliott, L., Ravikumar, R., Rybak, K., Altmann, M., Klaeger, S., Wiese, C., Abele, M., Al, B., Kalbfuß, N., Qi, X., Steiner, A., Meng, C., Zheng, H., Kuster, B., Falter-Braun, P., Ludwig, C., Moore, I., and Assaad, F.F. (2019). Interactions between Transport Protein Particle (TRAPP) complexes and Rab GTPases in Arabidopsis. Plant J 100:279-297.
Mucha, S., Heinzlmeir, S., Kriechbaumer, V., Strickland, B., Kirchhelle, C., Choudhary, M., Kowalski, N., Eichmann, R., Hückelhoven, R., Grill, E., Küster, B., and Glawischnig, E. (2019). The formation of a camalexin biosynthetic metabolon.Plant Cell 31:2697-2710.
Ruschhaupt, M., Mergner, J., Mucha, S., Papacek, M., Doch, I., Tischer, S., Hemmler, D., Chiasson, D., Edel, K.H., Kudla, J., Schmitt-Koplin, P., Kuster, B, and Grill, E (2019). Rebuilding core abscisic acid signaling pathways of Arabidopsis in yeast. EMBO J 38:e101859.
Gao, J., Chaudhary, A., Vaddepalli, P., Nagel, M-K., Isono, E. and Schneitz, K. (2019). Tissue morphogenesis mediated by the Arabidopsis receptor kinase STRUBBELIG involves a clathrin-dependent process.J Exp Bot 70:3881-3894.
Scholz, S., Pleßmann, J., Enugutti, B., Hüttl, R., Wassmer, K. and Schneitz, K. (2019). The AGC protein kinase UNICORN controls planar growth by attenuating PDK1 in Arabidopsis thaliana. PLoS Genetics 15:e1007927